Position Details
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This will be a full-time contract position for an initial period of 1 year, with the
possibility of extension.
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This position can be on-site in South San Francisco, CA, or remote (Continental
US or Canada only) during normal Pacific timezone business hours.
Duties
1.
2.
Compile and analyze internal and publicly available single-cell RNA-seq and
TCR-seq datasets.
This includes handling large datasets and understanding
integration methods.
Perform comprehensive analysis of various NGS data sets including bulk
RNA-seq, single-cell RNA-seq and single-cell TCR-seq.
3.
Act as an analyst on an NGS project, going from data exploration and
normalization, differential gene expression, pathway analysis, to producing
compelling data visualizations and presentations to colleagues.
4.
Complement existing code to generate specific plots and subsequent analysis
from existing project data, or perform one-off analyses of individual studies.
Skills
1.
2.
3.
4.
A recent PhD graduate in Bioinformatics, Genomics, or Computational Biology.
Strong statistical analysis and computational skills, including basic proficiency
using Linux-based servers and high level of proficiency with the R programming
language and packages such as ggplot2.
Relevant experience for dealing with large datasets: batch effect detection and
normalization, and confounding and covariate adjustment.
Experience organizing and documenting code.5. 6.
Strong communication skills including presenting and interpreting biology
focused results especially focused on immunology.
Experience with immunology and/or oncology is a plus, but not essential.
Bioinformatics Analyst (Immunology) Indianapolis, IN
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